Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ckap4Q8BMK4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ckap4Q8BMK4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
Ckap4Q8BMK4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ckap4Q8BMK4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ckap4Q8BMK4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ckap4Q8BMK4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.49□□□□□ -0.09
Ckap4Q8BMK4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Mir3081-201ENSMUST00000175305 84 ntBASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.48□□□□□ -0.09
Ckap4Q8BMK4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ckap4Q8BMK4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms