Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.77□□□□□ -0.05
Rnf38Q8BI21 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Rubie-203ENSMUST00000227803 2430 ntBASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Rnf38Q8BI21 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm21362-201ENSMUST00000194272 928 ntBASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf38Q8BI21 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms