Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Gm715-201ENSMUST00000117865 831 ntBASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Slc5a7Q8BGY9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Gm26039-201ENSMUST00000158152 144 ntBASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Slc5a7Q8BGY9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Slc5a7Q8BGY9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Slc5a7Q8BGY9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Slc5a7Q8BGY9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms