Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Sybu-209ENSMUST00000228639 4113 ntBASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim46Q7TNM2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.33□□□□□ -0.11
Trim46Q7TNM2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim46Q7TNM2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.32□□□□□ -0.12
Trim46Q7TNM2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim46Q7TNM2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms