Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Gm30025-201ENSMUST00000218555 728 ntBASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfx4Q7TNK1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx4Q7TNK1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Gm9987-201ENSMUST00000069768 567 ntBASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx4Q7TNK1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx4Q7TNK1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms