Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Herc4Q6PAV2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Gm18489-201ENSMUST00000172565 551 ntBASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herc4Q6PAV2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Herc4Q6PAV2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Herc4Q6PAV2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms