Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac4Q6NZM9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Hdac4Q6NZM9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac4Q6NZM9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hdac4Q6NZM9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Mir8098-201ENSMUST00000184011 137 ntBASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Hdac4Q6NZM9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hdac4Q6NZM9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Gm5864-201ENSMUST00000202263 970 ntBASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hdac4Q6NZM9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hdac4Q6NZM9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms