Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scube3Q66PY1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scube3Q66PY1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.03■□□□□ 0.16
Scube3Q66PY1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.03■□□□□ 0.16
Scube3Q66PY1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Gm12260-201ENSMUST00000122447 411 ntBASIC16.03■□□□□ 0.16
Scube3Q66PY1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Scube3Q66PY1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.02■□□□□ 0.16
Scube3Q66PY1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.02■□□□□ 0.16
Scube3Q66PY1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Gm11779-201ENSMUST00000118541 368 ntBASIC16.02■□□□□ 0.16
Scube3Q66PY1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.02■□□□□ 0.16
Scube3Q66PY1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.02■□□□□ 0.16
Scube3Q66PY1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scube3Q66PY1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scube3Q66PY1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.01■□□□□ 0.15
Scube3Q66PY1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.01■□□□□ 0.15
Scube3Q66PY1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scube3Q66PY1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Scube3Q66PY1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scube3Q66PY1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16■□□□□ 0.15
Scube3Q66PY1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Scube3Q66PY1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms