Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm21198-201ENSMUST00000188393 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21749-201ENSMUST00000189343 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21901-201ENSMUST00000189568 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm29424-201ENSMUST00000189716 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm28599-201ENSMUST00000189838 694 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21867-201ENSMUST00000189917 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm29269-201ENSMUST00000190087 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21722-201ENSMUST00000190153 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm28423-201ENSMUST00000190701 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21899-201ENSMUST00000190745 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21910-201ENSMUST00000191163 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21849-201ENSMUST00000191571 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm28678-201ENSMUST00000191593 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm20910-201ENSMUST00000193268 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm21871-201ENSMUST00000194621 696 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm6266-201ENSMUST00000203844 806 ntBASIC17.77■□□□□ 0.43
Scn9aQ62205 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn9aQ62205 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn9aQ62205 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scn9aQ62205 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scn9aQ62205 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scn9aQ62205 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Gm13829-201ENSMUST00000119600 138 ntBASIC17.76■□□□□ 0.43
Scn9aQ62205 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Mir1938-201ENSMUST00000158746 100 ntBASIC17.76■□□□□ 0.43
Scn9aQ62205 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.76■□□□□ 0.43
Scn9aQ62205 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Scn9aQ62205 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Gm20445-201ENSMUST00000061905 565 ntBASIC17.76■□□□□ 0.43
Scn9aQ62205 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Scn9aQ62205 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scn9aQ62205 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.75■□□□□ 0.43
Scn9aQ62205 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Scn9aQ62205 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.75■□□□□ 0.43
Scn9aQ62205 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gm5479-201ENSMUST00000160578 435 ntBASIC17.75■□□□□ 0.43
Scn9aQ62205 Gm21854-201ENSMUST00000179901 471 ntBASIC17.75■□□□□ 0.43
Scn9aQ62205 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.75■□□□□ 0.43
Scn9aQ62205 Gm18624-201ENSMUST00000220966 658 ntBASIC17.75■□□□□ 0.43
Scn9aQ62205 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn9aQ62205 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Scn9aQ62205 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.74■□□□□ 0.43
Scn9aQ62205 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Scn9aQ62205 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Scn9aQ62205 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn9aQ62205 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn9aQ62205 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms