Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Gm6244-201ENSMUST00000178732 841 ntBASIC14.9□□□□□ -0.02
Col12a1Q60847 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.9□□□□□ -0.02
Col12a1Q60847 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.9□□□□□ -0.02
Col12a1Q60847 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.9□□□□□ -0.02
Col12a1Q60847 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.9□□□□□ -0.02
Col12a1Q60847 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.9□□□□□ -0.02
Col12a1Q60847 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col12a1Q60847 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.89□□□□□ -0.03
Col12a1Q60847 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.89□□□□□ -0.03
Col12a1Q60847 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.89□□□□□ -0.03
Col12a1Q60847 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gm12176-201ENSMUST00000121420 875 ntBASIC14.89□□□□□ -0.03
Col12a1Q60847 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col12a1Q60847 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.89□□□□□ -0.03
Col12a1Q60847 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.89□□□□□ -0.03
Col12a1Q60847 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col12a1Q60847 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.88□□□□□ -0.03
Col12a1Q60847 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.88□□□□□ -0.03
Col12a1Q60847 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col12a1Q60847 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col12a1Q60847 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.87□□□□□ -0.03
Col12a1Q60847 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.87□□□□□ -0.03
Col12a1Q60847 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.87□□□□□ -0.03
Col12a1Q60847 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.87□□□□□ -0.03
Col12a1Q60847 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.87□□□□□ -0.03
Col12a1Q60847 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.87□□□□□ -0.03
Col12a1Q60847 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Mir6392-201ENSMUST00000184924 108 ntBASIC14.87□□□□□ -0.03
Col12a1Q60847 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.87□□□□□ -0.03
Col12a1Q60847 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col12a1Q60847 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col12a1Q60847 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms