Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Gm7730-201ENSMUST00000212486 454 ntBASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc85aQ5SP85 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Syt7-205ENSMUST00000224135 1557 ntBASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Gm18737-201ENSMUST00000173594 937 ntBASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Gm7653-201ENSMUST00000214567 508 ntBASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc85aQ5SP85 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Gm16215-201ENSMUST00000161990 637 ntBASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc85aQ5SP85 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Gm15483-201ENSMUST00000120338 456 ntBASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Gm44855-201ENSMUST00000205725 362 ntBASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc85aQ5SP85 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms