Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Prob1-201ENSMUST00000097619 3021 ntBASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Gm17271-201ENSMUST00000165535 355 ntBASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.21□□□□□ -0.45
Trav2Q5R1I9 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav2Q5R1I9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav2Q5R1I9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Grk6-207ENSMUST00000225925 2769 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Gm24513-201ENSMUST00000174964 138 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Gm27397-201ENSMUST00000184997 107 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav2Q5R1I9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav2Q5R1I9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms