Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3-1Q5R1I8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-1Q5R1I8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gm18041-201ENSMUST00000218210 618 ntBASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gm10232-201ENSMUST00000089221 720 ntBASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-1Q5R1I8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gm10209-201ENSMUST00000203397 1607 ntBASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms