Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Mir5130-201ENSMUST00000175160 84 ntBASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm27389-201ENSMUST00000183622 195 ntBASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav15-1-dv6-1Q5R1D2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav15-1-dv6-1Q5R1D2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms