Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm44313-201ENSMUST00000198018 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44486-201ENSMUST00000198508 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44314-201ENSMUST00000199263 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44394-201ENSMUST00000199558 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44484-201ENSMUST00000199873 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44466-201ENSMUST00000200264 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm44359-201ENSMUST00000200671 138 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Syne3Q4FZC9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Gm13884-201ENSMUST00000118103 829 ntBASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Gm19164-201ENSMUST00000210667 640 ntBASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syne3Q4FZC9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Gm18195-201ENSMUST00000207604 706 ntBASIC16.22■□□□□ 0.19
Syne3Q4FZC9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.22■□□□□ 0.19
Syne3Q4FZC9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne3Q4FZC9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Gm13418-201ENSMUST00000119097 944 ntBASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syne3Q4FZC9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms