Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.13■□□□□ 0.49
Spg7Q3ULF4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Spg7Q3ULF4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Spg7Q3ULF4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Mir449b-201ENSMUST00000104833 80 ntBASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Gm6973-201ENSMUST00000117080 721 ntBASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Spg7Q3ULF4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm22065-201ENSMUST00000103753 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm22066-201ENSMUST00000103761 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm24932-201ENSMUST00000103763 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm24115-201ENSMUST00000103799 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm22190-201ENSMUST00000103827 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm22191-201ENSMUST00000103831 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25287-201ENSMUST00000103846 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm24721-201ENSMUST00000103849 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm22918-201ENSMUST00000103855 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm28018-201ENSMUST00000103869 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm26399-201ENSMUST00000103937 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm11543-201ENSMUST00000120758 370 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Spg7Q3ULF4 AA543401-201ENSMUST00000164248 1269 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm18737-201ENSMUST00000173594 937 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25948-201ENSMUST00000175334 112 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25349-201ENSMUST00000177728 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm23616-201ENSMUST00000177797 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25871-201ENSMUST00000177816 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm24752-201ENSMUST00000178240 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm24496-201ENSMUST00000178287 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25649-201ENSMUST00000178476 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm25548-201ENSMUST00000178681 110 ntBASIC18.1■□□□□ 0.49
Spg7Q3ULF4 Gm23147-201ENSMUST00000178841 110 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms