Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.95■□□□□ 0.46
Col5a2Q3U962 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.95■□□□□ 0.46
Col5a2Q3U962 Gm6266-201ENSMUST00000203844 806 ntBASIC17.95■□□□□ 0.46
Col5a2Q3U962 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col5a2Q3U962 Gm20445-201ENSMUST00000061905 565 ntBASIC17.95■□□□□ 0.46
Col5a2Q3U962 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.94■□□□□ 0.46
Col5a2Q3U962 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Gm17150-201ENSMUST00000165577 381 ntBASIC17.94■□□□□ 0.46
Col5a2Q3U962 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.94■□□□□ 0.46
Col5a2Q3U962 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col5a2Q3U962 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm29310-201ENSMUST00000185468 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21825-201ENSMUST00000185728 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm29109-201ENSMUST00000185895 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21896-201ENSMUST00000186520 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21873-201ENSMUST00000186728 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21794-201ENSMUST00000187056 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21880-201ENSMUST00000187275 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21826-201ENSMUST00000187451 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21198-201ENSMUST00000188393 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21749-201ENSMUST00000189343 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21901-201ENSMUST00000189568 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm29424-201ENSMUST00000189716 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm28599-201ENSMUST00000189838 694 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21867-201ENSMUST00000189917 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm29269-201ENSMUST00000190087 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21722-201ENSMUST00000190153 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm28423-201ENSMUST00000190701 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21899-201ENSMUST00000190745 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21910-201ENSMUST00000191163 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21849-201ENSMUST00000191571 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm28678-201ENSMUST00000191593 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm20910-201ENSMUST00000193268 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 Gm21871-201ENSMUST00000194621 696 ntBASIC17.93■□□□□ 0.46
Col5a2Q3U962 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col5a2Q3U962 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Gm12091-201ENSMUST00000146791 830 ntBASIC17.92■□□□□ 0.46
Col5a2Q3U962 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.92■□□□□ 0.46
Col5a2Q3U962 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col5a2Q3U962 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms