Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp25Q3U435 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.35□□□□□ -0.11
Mmp25Q3U435 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mmp25Q3U435 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.34□□□□□ -0.11
Mmp25Q3U435 Gm15467-201ENSMUST00000120582 445 ntBASIC14.34□□□□□ -0.11
Mmp25Q3U435 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.34□□□□□ -0.11
Mmp25Q3U435 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mmp25Q3U435 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.33□□□□□ -0.11
Mmp25Q3U435 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mmp25Q3U435 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.33□□□□□ -0.12
Mmp25Q3U435 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Gm11779-201ENSMUST00000118541 368 ntBASIC14.33□□□□□ -0.12
Mmp25Q3U435 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Gm8000-201ENSMUST00000188378 592 ntBASIC14.33□□□□□ -0.12
Mmp25Q3U435 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.33□□□□□ -0.12
Mmp25Q3U435 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp25Q3U435 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.33□□□□□ -0.12
Mmp25Q3U435 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms