Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Znf541Q0GGX2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Znf541Q0GGX2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf541Q0GGX2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf541Q0GGX2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf541Q0GGX2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf541Q0GGX2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Znf541Q0GGX2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Znf541Q0GGX2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.67
Znf541Q0GGX2 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.27■□□□□ 0.67
Znf541Q0GGX2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Znf541Q0GGX2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm5479-201ENSMUST00000160578 435 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm43474-201ENSMUST00000196415 774 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm44335-201ENSMUST00000196879 141 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm44297-201ENSMUST00000198304 141 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Gm44346-201ENSMUST00000198851 141 ntBASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf541Q0GGX2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Gm37230-201ENSMUST00000194491 818 ntBASIC19.25■□□□□ 0.67
Znf541Q0GGX2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms