Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ptchd3Q0EEE2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.78□□□□□ -0.04
Ptchd3Q0EEE2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ptchd3Q0EEE2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ptchd3Q0EEE2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms