Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tff1Q08423 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Tff1Q08423 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tff1Q08423 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Gm6257-201ENSMUST00000163864 910 ntBASIC12.71□□□□□ -0.37
Tff1Q08423 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.71□□□□□ -0.37
Tff1Q08423 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.71□□□□□ -0.37
Tff1Q08423 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tff1Q08423 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.71□□□□□ -0.37
Tff1Q08423 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tff1Q08423 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tff1Q08423 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.71□□□□□ -0.38
Tff1Q08423 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Tff1Q08423 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.71□□□□□ -0.38
Tff1Q08423 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tff1Q08423 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Tff1Q08423 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Tff1Q08423 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.7□□□□□ -0.38
Tff1Q08423 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 Grk6-207ENSMUST00000225925 2769 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.7□□□□□ -0.38
Tff1Q08423 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Tff1Q08423 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tff1Q08423 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.7□□□□□ -0.38
Tff1Q08423 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.69□□□□□ -0.38
Tff1Q08423 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tff1Q08423 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.69□□□□□ -0.38
Tff1Q08423 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tff1Q08423 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tff1Q08423 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms