Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Atf4Q06507 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.56□□□□□ -0.08
Atf4Q06507 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.56□□□□□ -0.08
Atf4Q06507 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.56□□□□□ -0.08
Atf4Q06507 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.56□□□□□ -0.08
Atf4Q06507 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.56□□□□□ -0.08
Atf4Q06507 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.56□□□□□ -0.08
Atf4Q06507 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.56□□□□□ -0.08
Atf4Q06507 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Atf4Q06507 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Atf4Q06507 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Atf4Q06507 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Gm37293-201ENSMUST00000191658 295 ntBASIC14.55□□□□□ -0.08
Atf4Q06507 Gm9723-201ENSMUST00000192100 457 ntBASIC14.55□□□□□ -0.08
Atf4Q06507 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Atf4Q06507 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.55□□□□□ -0.08
Atf4Q06507 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Atf4Q06507 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Atf4Q06507 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.55□□□□□ -0.08
Atf4Q06507 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Atf4Q06507 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Atf4Q06507 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Atf4Q06507 Gm13183-201ENSMUST00000118615 789 ntBASIC14.54□□□□□ -0.08
Atf4Q06507 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.54□□□□□ -0.08
Atf4Q06507 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.54□□□□□ -0.08
Atf4Q06507 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.54□□□□□ -0.08
Atf4Q06507 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.54□□□□□ -0.08
Atf4Q06507 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Atf4Q06507 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Atf4Q06507 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Atf4Q06507 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Atf4Q06507 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Atf4Q06507 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Atf4Q06507 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.53□□□□□ -0.08
Atf4Q06507 Gm14701-201ENSMUST00000117156 348 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms