Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Npas1P97459 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Npas1P97459 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Npas1P97459 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.85□□□□□ -0.35
Npas1P97459 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Npas1P97459 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Npas1P97459 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.85□□□□□ -0.35
Npas1P97459 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Npas1P97459 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Npas1P97459 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Npas1P97459 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Npas1P97459 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.84□□□□□ -0.35
Npas1P97459 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Npas1P97459 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
Npas1P97459 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Npas1P97459 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.84□□□□□ -0.35
Npas1P97459 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Npas1P97459 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Npas1P97459 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Npas1P97459 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.83□□□□□ -0.36
Npas1P97459 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.83□□□□□ -0.36
Npas1P97459 Gm5417-201ENSMUST00000079706 384 ntBASIC12.83□□□□□ -0.36
Npas1P97459 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Npas1P97459 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Npas1P97459 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms