Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ThraP63058 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.48■□□□□ 0.07
ThraP63058 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.48■□□□□ 0.07
ThraP63058 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.48■□□□□ 0.07
ThraP63058 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.48■□□□□ 0.07
ThraP63058 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.48■□□□□ 0.07
ThraP63058 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.48■□□□□ 0.07
ThraP63058 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.48■□□□□ 0.07
ThraP63058 Gm8655-201ENSMUST00000221159 852 ntBASIC15.48■□□□□ 0.07
ThraP63058 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.48■□□□□ 0.07
ThraP63058 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ThraP63058 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ThraP63058 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ThraP63058 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ThraP63058 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ThraP63058 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.47■□□□□ 0.07
ThraP63058 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
ThraP63058 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Gm11780-201ENSMUST00000136880 516 ntBASIC15.47■□□□□ 0.07
ThraP63058 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.47■□□□□ 0.07
ThraP63058 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.47■□□□□ 0.07
ThraP63058 AV026068-213ENSMUST00000223675 1171 ntBASIC15.47■□□□□ 0.07
ThraP63058 Psmb5-202ENSMUST00000227257 622 ntBASIC15.47■□□□□ 0.07
ThraP63058 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ThraP63058 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ThraP63058 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.47■□□□□ 0.07
ThraP63058 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ThraP63058 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ThraP63058 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
ThraP63058 BC037039-201ENSMUST00000192003 2205 ntBASIC15.46■□□□□ 0.07
ThraP63058 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Gm11779-201ENSMUST00000118541 368 ntBASIC15.46■□□□□ 0.07
ThraP63058 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
ThraP63058 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.46■□□□□ 0.07
ThraP63058 Gm6550-201ENSMUST00000187574 993 ntBASIC15.46■□□□□ 0.07
ThraP63058 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.46■□□□□ 0.07
ThraP63058 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ThraP63058 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.46■□□□□ 0.07
ThraP63058 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ThraP63058 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ThraP63058 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ThraP63058 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ThraP63058 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ThraP63058 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
ThraP63058 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.45■□□□□ 0.06
ThraP63058 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.45■□□□□ 0.06
ThraP63058 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Gm15590-201ENSMUST00000078419 552 ntBASIC15.45■□□□□ 0.06
ThraP63058 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.45■□□□□ 0.06
ThraP63058 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ThraP63058 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ThraP63058 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms