Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Mir6404-201ENSMUST00000183699 94 ntBASIC10.92□□□□□ -0.66
Rpl39P62892 Mir1668-201ENSMUST00000184114 107 ntBASIC10.92□□□□□ -0.66
Rpl39P62892 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.92□□□□□ -0.66
Rpl39P62892 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rpl39P62892 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rpl39P62892 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Gm12134-201ENSMUST00000122109 520 ntBASIC10.91□□□□□ -0.66
Rpl39P62892 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Rpl39P62892 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.91□□□□□ -0.66
Rpl39P62892 Gm30025-201ENSMUST00000218555 728 ntBASIC10.91□□□□□ -0.66
Rpl39P62892 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.91□□□□□ -0.66
Rpl39P62892 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rpl39P62892 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.91□□□□□ -0.66
Rpl39P62892 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rpl39P62892 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rpl39P62892 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rpl39P62892 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rpl39P62892 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Rpl39P62892 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.9□□□□□ -0.66
Rpl39P62892 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rpl39P62892 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rpl39P62892 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Rpl39P62892 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl39P62892 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl39P62892 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms