Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup43P59235 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.43□□□□□ -0.1
Nup43P59235 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup43P59235 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nup43P59235 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup43P59235 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup43P59235 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup43P59235 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup43P59235 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nup43P59235 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup43P59235 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Asic1-205ENSMUST00000228185 1818 ntBASIC14.43□□□□□ -0.1
Nup43P59235 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup43P59235 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Nup43P59235 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.42□□□□□ -0.1
Nup43P59235 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Gm10499-201ENSMUST00000174094 934 ntBASIC14.42□□□□□ -0.1
Nup43P59235 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Gm4899-201ENSMUST00000178708 719 ntBASIC14.42□□□□□ -0.1
Nup43P59235 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.42□□□□□ -0.1
Nup43P59235 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.42□□□□□ -0.1
Nup43P59235 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Nup43P59235 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup43P59235 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.41□□□□□ -0.1
Nup43P59235 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.41□□□□□ -0.1
Nup43P59235 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Nup43P59235 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.41□□□□□ -0.1
Nup43P59235 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup43P59235 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup43P59235 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup43P59235 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup43P59235 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms