Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.71■□□□□ 0.59
Tm6sf1P58749 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tm6sf1P58749 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tm6sf1P58749 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tm6sf1P58749 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.7■□□□□ 0.58
Tm6sf1P58749 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tm6sf1P58749 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.69■□□□□ 0.58
Tm6sf1P58749 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tm6sf1P58749 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tm6sf1P58749 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Gm12008-201ENSMUST00000117791 755 ntBASIC18.67■□□□□ 0.58
Tm6sf1P58749 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms