Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.84□□□□□ -0.03
Hnf4aP49698 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Hnf4aP49698 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Hnf4aP49698 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hnf4aP49698 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hnf4aP49698 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hnf4aP49698 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Hnf4aP49698 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hnf4aP49698 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.83□□□□□ -0.04
Hnf4aP49698 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hnf4aP49698 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.83□□□□□ -0.04
Hnf4aP49698 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.83□□□□□ -0.04
Hnf4aP49698 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.83□□□□□ -0.04
Hnf4aP49698 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hnf4aP49698 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.82□□□□□ -0.04
Hnf4aP49698 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.82□□□□□ -0.04
Hnf4aP49698 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.82□□□□□ -0.04
Hnf4aP49698 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hnf4aP49698 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Hnf4aP49698 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.81□□□□□ -0.04
Hnf4aP49698 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.81□□□□□ -0.04
Hnf4aP49698 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Hnf4aP49698 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hnf4aP49698 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hnf4aP49698 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.8□□□□□ -0.04
Hnf4aP49698 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hnf4aP49698 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms