Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14□□□□□ -0.17
Nkx2-2P42586 Mir5126-201ENSMUST00000175513 77 ntBASIC14□□□□□ -0.17
Nkx2-2P42586 Gm4899-201ENSMUST00000178708 719 ntBASIC14□□□□□ -0.17
Nkx2-2P42586 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14□□□□□ -0.17
Nkx2-2P42586 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nkx2-2P42586 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-2P42586 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-2P42586 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-2P42586 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-2P42586 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nkx2-2P42586 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.99□□□□□ -0.17
Nkx2-2P42586 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.99□□□□□ -0.17
Nkx2-2P42586 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-2P42586 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-2P42586 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.97□□□□□ -0.17
Nkx2-2P42586 Gm12350-201ENSMUST00000121208 462 ntBASIC13.97□□□□□ -0.17
Nkx2-2P42586 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.97□□□□□ -0.17
Nkx2-2P42586 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Gm15590-201ENSMUST00000078419 552 ntBASIC13.97□□□□□ -0.17
Nkx2-2P42586 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms