Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmx3P42581 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmx3P42581 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.81□□□□□ -0.36
Hmx3P42581 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Hmx3P42581 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Hmx3P42581 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.8□□□□□ -0.36
Hmx3P42581 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Hmx3P42581 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmx3P42581 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmx3P42581 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Hmx3P42581 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmx3P42581 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm6433-201ENSMUST00000118634 875 ntBASIC12.79□□□□□ -0.36
Hmx3P42581 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmx3P42581 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmx3P42581 Efs-202ENSMUST00000227037 2540 ntBASIC12.79□□□□□ -0.36
Hmx3P42581 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Hmx3P42581 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmx3P42581 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmx3P42581 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.78□□□□□ -0.36
Hmx3P42581 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Hmx3P42581 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hmx3P42581 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.78□□□□□ -0.36
Hmx3P42581 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms