Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gm4459-201ENSMUST00000118750 468 ntBASIC18.82■□□□□ 0.6
Nkx1-2P42580 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.82■□□□□ 0.6
Nkx1-2P42580 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gm18622-201ENSMUST00000219361 595 ntBASIC18.82■□□□□ 0.6
Nkx1-2P42580 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx1-2P42580 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Sybu-209ENSMUST00000228639 4113 ntBASIC18.81■□□□□ 0.6
Nkx1-2P42580 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.81■□□□□ 0.6
Nkx1-2P42580 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx1-2P42580 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nkx1-2P42580 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.8■□□□□ 0.6
Nkx1-2P42580 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx1-2P42580 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Gm12895-201ENSMUST00000122214 226 ntBASIC18.79■□□□□ 0.6
Nkx1-2P42580 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.79■□□□□ 0.6
Nkx1-2P42580 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx1-2P42580 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx1-2P42580 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms