Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.55□□□□□ -0.4
VhlP40338 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VhlP40338 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VhlP40338 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VhlP40338 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VhlP40338 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VhlP40338 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VhlP40338 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
VhlP40338 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.54□□□□□ -0.4
VhlP40338 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VhlP40338 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VhlP40338 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.54□□□□□ -0.4
VhlP40338 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.54□□□□□ -0.4
VhlP40338 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VhlP40338 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VhlP40338 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VhlP40338 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VhlP40338 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.54□□□□□ -0.4
VhlP40338 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.53□□□□□ -0.4
VhlP40338 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VhlP40338 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.53□□□□□ -0.4
VhlP40338 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.53□□□□□ -0.4
VhlP40338 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VhlP40338 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VhlP40338 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.53□□□□□ -0.4
VhlP40338 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VhlP40338 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VhlP40338 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VhlP40338 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms