Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Timp3P39876 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Timp3P39876 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Timp3P39876 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Timp3P39876 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Sybu-209ENSMUST00000228639 4113 ntBASIC12.53□□□□□ -0.4
Timp3P39876 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Gm6257-201ENSMUST00000163864 910 ntBASIC12.53□□□□□ -0.4
Timp3P39876 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.53□□□□□ -0.4
Timp3P39876 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.53□□□□□ -0.4
Timp3P39876 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.53□□□□□ -0.4
Timp3P39876 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Timp3P39876 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Timp3P39876 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.53□□□□□ -0.4
Timp3P39876 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 App-207ENSMUST00000227737 2827 ntBASIC12.52□□□□□ -0.4
Timp3P39876 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Timp3P39876 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Timp3P39876 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Timp3P39876 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.52□□□□□ -0.41
Timp3P39876 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Timp3P39876 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Timp3P39876 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.52□□□□□ -0.41
Timp3P39876 Gm27646-201ENSMUST00000183989 110 ntBASIC12.52□□□□□ -0.41
Timp3P39876 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.52□□□□□ -0.41
Timp3P39876 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.52□□□□□ -0.41
Timp3P39876 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.52□□□□□ -0.41
Timp3P39876 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.52□□□□□ -0.41
Timp3P39876 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Timp3P39876 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.52□□□□□ -0.41
Timp3P39876 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Timp3P39876 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.52□□□□□ -0.41
Timp3P39876 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Gm12260-201ENSMUST00000122447 411 ntBASIC12.51□□□□□ -0.41
Timp3P39876 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.51□□□□□ -0.41
Timp3P39876 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.51□□□□□ -0.41
Timp3P39876 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.51□□□□□ -0.41
Timp3P39876 Gm2756-201ENSMUST00000195851 400 ntBASIC12.51□□□□□ -0.41
Timp3P39876 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.51□□□□□ -0.41
Timp3P39876 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Timp3P39876 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Timp3P39876 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Timp3P39876 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms