Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.11□□□□□ -0.47
Rom1P32958 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.11□□□□□ -0.47
Rom1P32958 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rom1P32958 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rom1P32958 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.11□□□□□ -0.47
Rom1P32958 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rom1P32958 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.11□□□□□ -0.47
Rom1P32958 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rom1P32958 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rom1P32958 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rom1P32958 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rom1P32958 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.1□□□□□ -0.47
Rom1P32958 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.1□□□□□ -0.47
Rom1P32958 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.1□□□□□ -0.47
Rom1P32958 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.1□□□□□ -0.47
Rom1P32958 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rom1P32958 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rom1P32958 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rom1P32958 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.1□□□□□ -0.47
Rom1P32958 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rom1P32958 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Rom1P32958 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.09□□□□□ -0.47
Rom1P32958 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rom1P32958 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rom1P32958 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.09□□□□□ -0.47
Rom1P32958 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rom1P32958 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rom1P32958 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rom1P32958 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rom1P32958 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rom1P32958 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.08□□□□□ -0.48
Rom1P32958 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rom1P32958 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rom1P32958 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms