Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm11434-201ENSMUST00000122379 629 ntBASIC15.7■□□□□ 0.1
Hoxd8P23463 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxd8P23463 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.7■□□□□ 0.1
Hoxd8P23463 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxd8P23463 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxd8P23463 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.7■□□□□ 0.1
Hoxd8P23463 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.7■□□□□ 0.1
Hoxd8P23463 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxd8P23463 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.69■□□□□ 0.1
Hoxd8P23463 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxd8P23463 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxd8P23463 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.68■□□□□ 0.1
Hoxd8P23463 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.68■□□□□ 0.1
Hoxd8P23463 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxd8P23463 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxd8P23463 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.68■□□□□ 0.1
Hoxd8P23463 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxd8P23463 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Hoxd8P23463 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm25144-201ENSMUST00000179561 110 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm25352-201ENSMUST00000179815 110 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm28630-201ENSMUST00000187806 498 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm19891-201ENSMUST00000189771 303 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxd8P23463 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.67■□□□□ 0.1
Hoxd8P23463 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxd8P23463 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxd8P23463 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Hoxd8P23463 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Hoxd8P23463 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hoxd8P23463 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.66■□□□□ 0.1
Hoxd8P23463 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.66■□□□□ 0.1
Hoxd8P23463 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hoxd8P23463 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms