Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.06□□□□□ -0.32
P04946 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04946 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04946 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04946 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.05□□□□□ -0.32
P04946 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P04946 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.05□□□□□ -0.32
P04946 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.05□□□□□ -0.32
P04946 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Gm44487-201ENSMUST00000205145 325 ntBASIC13.05□□□□□ -0.32
P04946 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.05□□□□□ -0.32
P04946 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.05□□□□□ -0.32
P04946 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.05□□□□□ -0.32
P04946 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P04946 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P04946 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.05□□□□□ -0.32
P04946 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.05□□□□□ -0.32
P04946 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.05□□□□□ -0.32
P04946 Celf4-206ENSMUST00000224553 1729 ntBASIC13.05□□□□□ -0.32
P04946 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04946 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
P04946 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.04□□□□□ -0.32
P04946 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.04□□□□□ -0.32
P04946 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.04□□□□□ -0.32
P04946 Gm13365-201ENSMUST00000121188 973 ntBASIC13.04□□□□□ -0.32
P04946 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Rprl2-201ENSMUST00000157150 290 ntBASIC13.04□□□□□ -0.32
P04946 Gm16026-204ENSMUST00000162652 683 ntBASIC13.04□□□□□ -0.32
P04946 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
P04946 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.04□□□□□ -0.32
P04946 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04946 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.04□□□□□ -0.32
P04946 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
P04946 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.04□□□□□ -0.32
P04946 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Gm8396-201ENSMUST00000057361 823 ntBASIC13.04□□□□□ -0.32
P04946 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
P04946 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.04□□□□□ -0.32
P04946 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04946 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.04□□□□□ -0.32
P04946 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
P04946 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04946 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
P04946 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P04946 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04946 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04946 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
P04946 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04946 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04946 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04946 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms