Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
TcraP01849 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TcraP01849 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
TcraP01849 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.19□□□□□ -0.62
TcraP01849 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TcraP01849 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TcraP01849 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.19□□□□□ -0.62
TcraP01849 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
TcraP01849 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.19□□□□□ -0.62
TcraP01849 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.18□□□□□ -0.62
TcraP01849 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gm3375-201ENSMUST00000203929 796 ntBASIC11.18□□□□□ -0.62
TcraP01849 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TcraP01849 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TcraP01849 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
TcraP01849 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.17□□□□□ -0.62
TcraP01849 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
TcraP01849 Gm12134-201ENSMUST00000122109 520 ntBASIC11.17□□□□□ -0.62
TcraP01849 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.17□□□□□ -0.62
TcraP01849 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.17□□□□□ -0.62
TcraP01849 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.17□□□□□ -0.62
TcraP01849 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.17□□□□□ -0.62
TcraP01849 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.17□□□□□ -0.62
TcraP01849 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TcraP01849 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
TcraP01849 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TcraP01849 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms