Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Gm7222-201ENSMUST00000117512 906 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Gm9682-201ENSMUST00000197505 556 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Igh-VJ558P01758 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Igh-VJ558P01758 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Igh-VJ558P01758 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Igh-VJ558P01758 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Igh-VJ558P01758 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Igh-VJ558P01758 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Gm7862-201ENSMUST00000121461 292 ntBASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.2□□□□□ -0.3
Igh-VJ558P01758 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Igh-VJ558P01758 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Gm7153-201ENSMUST00000117092 455 ntBASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Gm11764-201ENSMUST00000120221 623 ntBASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igh-VJ558P01758 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm6550-201ENSMUST00000187574 993 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms