Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.84□□□□□ -0.67
Sh2d1aO88890 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm15165-201ENSMUST00000118140 502 ntBASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm7977-201ENSMUST00000193787 748 ntBASIC10.84□□□□□ -0.67
Sh2d1aO88890 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.84□□□□□ -0.67
Sh2d1aO88890 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.84□□□□□ -0.67
Sh2d1aO88890 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Sh2d1aO88890 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm8825-201ENSMUST00000182565 998 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm4518-201ENSMUST00000182638 718 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm17807-201ENSMUST00000186869 298 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm7506-201ENSMUST00000207758 815 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.83□□□□□ -0.68
Sh2d1aO88890 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms