Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.58■□□□□ 0.4
Sema3fO88632 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.58■□□□□ 0.4
Sema3fO88632 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.58■□□□□ 0.4
Sema3fO88632 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sema3fO88632 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.58■□□□□ 0.4
Sema3fO88632 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Sema3fO88632 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.58■□□□□ 0.4
Sema3fO88632 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sema3fO88632 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.57■□□□□ 0.4
Sema3fO88632 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Auts2-212ENSMUST00000178555 309 ntBASIC17.57■□□□□ 0.4
Sema3fO88632 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.57■□□□□ 0.4
Sema3fO88632 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.57■□□□□ 0.4
Sema3fO88632 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.57■□□□□ 0.4
Sema3fO88632 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sema3fO88632 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sema3fO88632 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Sema3fO88632 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.56■□□□□ 0.4
Sema3fO88632 Gm18889-201ENSMUST00000174284 929 ntBASIC17.56■□□□□ 0.4
Sema3fO88632 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.56■□□□□ 0.4
Sema3fO88632 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sema3fO88632 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.56■□□□□ 0.4
Sema3fO88632 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sema3fO88632 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.55■□□□□ 0.4
Sema3fO88632 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Sema3fO88632 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.55■□□□□ 0.4
Sema3fO88632 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Sema3fO88632 Mir6990-201ENSMUST00000183724 91 ntBASIC17.55■□□□□ 0.4
Sema3fO88632 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.55■□□□□ 0.4
Sema3fO88632 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.55■□□□□ 0.4
Sema3fO88632 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.55■□□□□ 0.4
Sema3fO88632 Gm10154-201ENSMUST00000084445 354 ntBASIC17.55■□□□□ 0.4
Sema3fO88632 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
Sema3fO88632 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sema3fO88632 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sema3fO88632 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.54■□□□□ 0.4
Sema3fO88632 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sema3fO88632 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sema3fO88632 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sema3fO88632 Gm43474-201ENSMUST00000196415 774 ntBASIC17.54■□□□□ 0.4
Sema3fO88632 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.54■□□□□ 0.4
Sema3fO88632 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.54■□□□□ 0.4
Sema3fO88632 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sema3fO88632 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sema3fO88632 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms