Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cldn1O88551 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cldn1O88551 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Cldn1O88551 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cldn1O88551 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.09□□□□□ -0.31
Cldn1O88551 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cldn1O88551 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Gm12428-201ENSMUST00000119844 727 ntBASIC13.09□□□□□ -0.31
Cldn1O88551 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.09□□□□□ -0.31
Cldn1O88551 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.09□□□□□ -0.31
Cldn1O88551 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.09□□□□□ -0.31
Cldn1O88551 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cldn1O88551 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.09□□□□□ -0.31
Cldn1O88551 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.09□□□□□ -0.31
Cldn1O88551 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cldn1O88551 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cldn1O88551 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cldn1O88551 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cldn1O88551 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cldn1O88551 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cldn1O88551 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cldn1O88551 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cldn1O88551 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Cldn1O88551 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Cldn1O88551 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.08□□□□□ -0.32
Cldn1O88551 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Gm11424-201ENSMUST00000121929 829 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.08□□□□□ -0.32
Cldn1O88551 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Cldn1O88551 Gm23547-201ENSMUST00000158210 271 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cldn1O88551 Gm18889-201ENSMUST00000174284 929 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Gm22175-201ENSMUST00000175007 78 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cldn1O88551 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.08□□□□□ -0.32
Cldn1O88551 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cldn1O88551 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cldn1O88551 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.07□□□□□ -0.32
Cldn1O88551 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.07□□□□□ -0.32
Cldn1O88551 Gm18489-201ENSMUST00000172565 551 ntBASIC13.07□□□□□ -0.32
Cldn1O88551 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms