Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.77□□□□□ -0.05
Cacna1hO88427 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cacna1hO88427 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.77□□□□□ -0.05
Cacna1hO88427 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.76□□□□□ -0.05
Cacna1hO88427 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cacna1hO88427 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacna1hO88427 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacna1hO88427 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacna1hO88427 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cacna1hO88427 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cacna1hO88427 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.76□□□□□ -0.05
Cacna1hO88427 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.76□□□□□ -0.05
Cacna1hO88427 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cacna1hO88427 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1hO88427 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Mir1897-201ENSMUST00000122581 272 ntBASIC14.75□□□□□ -0.05
Cacna1hO88427 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.75□□□□□ -0.05
Cacna1hO88427 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cacna1hO88427 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.75□□□□□ -0.05
Cacna1hO88427 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1hO88427 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.74□□□□□ -0.05
Cacna1hO88427 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.74□□□□□ -0.05
Cacna1hO88427 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cacna1hO88427 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1hO88427 Gm14723-201ENSMUST00000118686 215 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms