Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn2O70591 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn2O70591 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn2O70591 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn2O70591 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.78□□□□□ -0.36
Pfdn2O70591 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn2O70591 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn2O70591 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn2O70591 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn2O70591 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.77□□□□□ -0.36
Pfdn2O70591 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.77□□□□□ -0.36
Pfdn2O70591 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn2O70591 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pfdn2O70591 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Gm30025-201ENSMUST00000218555 728 ntBASIC12.77□□□□□ -0.37
Pfdn2O70591 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.77□□□□□ -0.37
Pfdn2O70591 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.77□□□□□ -0.37
Pfdn2O70591 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Gm5417-201ENSMUST00000079706 384 ntBASIC12.77□□□□□ -0.37
Pfdn2O70591 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn2O70591 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn2O70591 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.76□□□□□ -0.37
Pfdn2O70591 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.76□□□□□ -0.37
Pfdn2O70591 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pfdn2O70591 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn2O70591 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.76□□□□□ -0.37
Pfdn2O70591 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn2O70591 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.75□□□□□ -0.37
Pfdn2O70591 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn2O70591 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.75□□□□□ -0.37
Pfdn2O70591 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.75□□□□□ -0.37
Pfdn2O70591 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.75□□□□□ -0.37
Pfdn2O70591 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms