Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.22■□□□□ 0.03
Pknox1O70477 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.22■□□□□ 0.03
Pknox1O70477 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pknox1O70477 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pknox1O70477 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Pknox1O70477 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pknox1O70477 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Gm4459-201ENSMUST00000118750 468 ntBASIC15.21■□□□□ 0.03
Pknox1O70477 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.21■□□□□ 0.03
Pknox1O70477 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pknox1O70477 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.21■□□□□ 0.03
Pknox1O70477 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.21■□□□□ 0.03
Pknox1O70477 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.21■□□□□ 0.03
Pknox1O70477 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Pknox1O70477 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pknox1O70477 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pknox1O70477 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pknox1O70477 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.21■□□□□ 0.02
Pknox1O70477 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.21■□□□□ 0.02
Pknox1O70477 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.21■□□□□ 0.02
Pknox1O70477 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pknox1O70477 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pknox1O70477 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.2■□□□□ 0.02
Pknox1O70477 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.2■□□□□ 0.02
Pknox1O70477 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pknox1O70477 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pknox1O70477 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.2■□□□□ 0.02
Pknox1O70477 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.2■□□□□ 0.02
Pknox1O70477 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pknox1O70477 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pknox1O70477 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.19■□□□□ 0.02
Pknox1O70477 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.19■□□□□ 0.02
Pknox1O70477 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pknox1O70477 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.19■□□□□ 0.02
Pknox1O70477 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Pknox1O70477 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pknox1O70477 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pknox1O70477 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pknox1O70477 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.19■□□□□ 0.02
Pknox1O70477 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pknox1O70477 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pknox1O70477 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pknox1O70477 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pknox1O70477 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pknox1O70477 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pknox1O70477 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.18■□□□□ 0.02
Pknox1O70477 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pknox1O70477 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pknox1O70477 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pknox1O70477 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms