Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.87□□□□□ -0.19
Pdlim3O70209 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim3O70209 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.87□□□□□ -0.19
Pdlim3O70209 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim3O70209 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.86□□□□□ -0.19
Pdlim3O70209 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.86□□□□□ -0.19
Pdlim3O70209 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.86□□□□□ -0.19
Pdlim3O70209 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim3O70209 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim3O70209 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim3O70209 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim3O70209 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.85□□□□□ -0.19
Pdlim3O70209 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim3O70209 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim3O70209 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.84□□□□□ -0.19
Pdlim3O70209 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Gm13312-201ENSMUST00000119631 718 ntBASIC13.84□□□□□ -0.19
Pdlim3O70209 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Gm5587-201ENSMUST00000206270 674 ntBASIC13.84□□□□□ -0.19
Pdlim3O70209 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms