Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.73□□□□□ -0.05
Cacna1bO55017 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.73□□□□□ -0.05
Cacna1bO55017 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm18766-201ENSMUST00000189811 808 ntBASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm28631-201ENSMUST00000190740 334 ntBASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.72□□□□□ -0.05
Cacna1bO55017 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.72□□□□□ -0.05
Cacna1bO55017 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Gm9824-201ENSMUST00000178707 561 ntBASIC14.72□□□□□ -0.05
Cacna1bO55017 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.72□□□□□ -0.05
Cacna1bO55017 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cacna1bO55017 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.71□□□□□ -0.05
Cacna1bO55017 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.71□□□□□ -0.05
Cacna1bO55017 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.71□□□□□ -0.05
Cacna1bO55017 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cacna1bO55017 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cacna1bO55017 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Cacna1bO55017 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Cacna1bO55017 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.71□□□□□ -0.05
Cacna1bO55017 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cacna1bO55017 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cacna1bO55017 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cacna1bO55017 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cacna1bO55017 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cacna1bO55017 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.7□□□□□ -0.06
Cacna1bO55017 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.7□□□□□ -0.06
Cacna1bO55017 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Gm28630-201ENSMUST00000187806 498 ntBASIC14.7□□□□□ -0.06
Cacna1bO55017 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.7□□□□□ -0.06
Cacna1bO55017 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cacna1bO55017 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms