Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gfra3O35118 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfra3O35118 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 App-207ENSMUST00000227737 2827 ntBASIC13.22□□□□□ -0.29
Gfra3O35118 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.22□□□□□ -0.29
Gfra3O35118 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.22□□□□□ -0.29
Gfra3O35118 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gfra3O35118 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gfra3O35118 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.22□□□□□ -0.29
Gfra3O35118 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.22□□□□□ -0.29
Gfra3O35118 Gm14722-201ENSMUST00000118943 689 ntBASIC13.22□□□□□ -0.29
Gfra3O35118 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.22□□□□□ -0.29
Gfra3O35118 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Gm8318-201ENSMUST00000182954 872 ntBASIC13.22□□□□□ -0.29
Gfra3O35118 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gfra3O35118 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gfra3O35118 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfra3O35118 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gfra3O35118 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gfra3O35118 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.21□□□□□ -0.29
Gfra3O35118 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Gfra3O35118 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.21□□□□□ -0.29
Gfra3O35118 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Gm37935-201ENSMUST00000192012 982 ntBASIC13.21□□□□□ -0.29
Gfra3O35118 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.21□□□□□ -0.29
Gfra3O35118 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.21□□□□□ -0.29
Gfra3O35118 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.21□□□□□ -0.29
Gfra3O35118 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gfra3O35118 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfra3O35118 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gfra3O35118 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gfra3O35118 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfra3O35118 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gfra3O35118 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.2□□□□□ -0.3
Gfra3O35118 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Gfra3O35118 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.2□□□□□ -0.3
Gfra3O35118 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.2□□□□□ -0.3
Gfra3O35118 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.2□□□□□ -0.3
Gfra3O35118 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms