Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.73■□□□□ 0.11
Trove2O08848 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trove2O08848 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trove2O08848 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Gm23634-201ENSMUST00000175071 91 ntBASIC15.72■□□□□ 0.11
Trove2O08848 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.72■□□□□ 0.11
Trove2O08848 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
Trove2O08848 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trove2O08848 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.72■□□□□ 0.11
Trove2O08848 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.72■□□□□ 0.11
Trove2O08848 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trove2O08848 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Trove2O08848 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.71■□□□□ 0.11
Trove2O08848 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trove2O08848 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trove2O08848 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.71■□□□□ 0.11
Trove2O08848 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Trove2O08848 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trove2O08848 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trove2O08848 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trove2O08848 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trove2O08848 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.7■□□□□ 0.1
Trove2O08848 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.7■□□□□ 0.1
Trove2O08848 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trove2O08848 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trove2O08848 AA414768-201ENSMUST00000121924 1257 ntBASIC15.7■□□□□ 0.1
Trove2O08848 Gm6659-201ENSMUST00000174752 547 ntBASIC15.7■□□□□ 0.1
Trove2O08848 Gm44430-201ENSMUST00000203376 995 ntBASIC15.7■□□□□ 0.1
Trove2O08848 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.7■□□□□ 0.1
Trove2O08848 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trove2O08848 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms