Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdh11xF6ZNL5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm7222-201ENSMUST00000117512 906 ntBASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm9682-201ENSMUST00000197505 556 ntBASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdh11xF6ZNL5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh11xF6ZNL5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh11xF6ZNL5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh11xF6ZNL5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh11xF6ZNL5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh11xF6ZNL5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms