Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Gm9172-201ENSMUST00000212092 954 ntBASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
C530025M09RikF6RGA8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Olfr129-201ENSMUST00000122318 993 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Mir3081-201ENSMUST00000175305 84 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm44454-201ENSMUST00000198541 138 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm19164-201ENSMUST00000210667 640 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
C530025M09RikF6RGA8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm12134-201ENSMUST00000122109 520 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms